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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
DNase-seq
4
pCHi-C
2
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
15
Transcription
5
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
19
October, 2019
6
June, 2019
1
February, 2020
1
July, 2019
Available data
6
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
27
Homo sapiens
Biosample type
23
tissue
4
primary cell
Organ
810
pancreas
729
liver
636
connective tissue
477
adipose tissue
418
epithelium
339
kidney
314
heart
173
vasculature
168
blood vessel
168
brain
151
bone element
107
limb
100
artery
81
musculature of body
68
blood
68
bodily fluid
35
nerve
29
embryo
27
eye
23
spleen
20
lung
18
ureter
15
vein
8
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
27
AMP-T2D consortium
month_released!
February, 2023
target.investigated_as!
narrow histone mark
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
27 results
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total RNA-seq
DNase-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
1
retina
1
3
primary cell
retinal pigment epithelial cell
1
2
1
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