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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
10
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
10
DNA accessibility
Date released
6
June, 2019
4
October, 2019
Available data
10
bam
10
bed bed3+
10
bed broadPeak
10
bed narrowPeak
10
bigBed broadPeak
10
bigBed narrowPeak
10
bigWig
Organism
10
Homo sapiens
Biosample type
5
primary cell
5
tissue
Organ
80
kidney
35
limb
32
brain
32
musculature of body
29
heart
18
epithelium
18
ureter
10
vasculature
9
blood vessel
8
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
10
AMP
Genome assembly (visualization)
10
GRCh38
9
hg19
Lab
10
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
January, 2018
April, 2018
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
10 results
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DNase-seq
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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