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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
8
ChIP-seq
Assay category
14
Transcription
8
DNA binding
Target of assay
7
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
7
February, 2018
5
December, 2017
2
May, 2021
January, 2018
Available data
36
bam
28
bigWig
26
fastq
bed narrowPeak
14
tsv
3
bed bed3+
Organism
22
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
cell line
Organ
706
pancreas
608
connective tissue
477
adipose tissue
350
liver
347
epithelium
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
35
musculature of body
30
limb
28
eye
22
embryo
20
lung
16
nerve
14
blood
14
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
22
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
month_released!
January, 2018
September, 2018
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
22 results
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Clear Filters
total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
6
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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