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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
22
DNA binding
8
Transcription
Target of assay
21
control
1
histone
1
histone modification
1
narrow histone mark
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
99
bam
94
fastq
77
bigWig
bed narrowPeak
50
bigBed narrowPeak
15
bed bed3+
9
tsv
Organism
32
Homo sapiens
Biosample type
15
tissue
11
in vitro differentiated cells
5
primary cell
1
stem cell
Organ
18
liver
9
epithelium
5
embryo
3
kidney
Project
32
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
32
AMP-T2D consortium
Audit category:
4
audit script error
4
inconsistent ontology term
Audit category:
1
missing controlled_by
month_released!
January, 2018
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
liver
9
right lobe of liver
3
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
cardiomyocytes (cardiac muscle cell)
2
Posterior foregut
1
definitive endodermal cell
1
+ See 2 more…
primary cell
hepatocyte
5
stem cell
hESC
1
See all biosamples
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