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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
18
small RNA-seq
12
WGBS
9
RRBS
6
ATAC-seq
6
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
21
DNA methylation
21
Transcription
8
DNA accessibility
6
3D chromatin structure
Target of assay
3
control
Date released
400
November, 2017
293
August, 2017
252
October, 2019
239
August, 2021
198
June, 2019
197
May, 2021
164
February, 2021
151
May, 2020
115
May, 2019
99
February, 2023
94
May, 2022
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
56
July, 2019
47
September, 2023
45
March, 2020
40
May, 2024
40
September, 2020
35
December, 2018
26
November, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
July, 2018
14
May, 2023
12
September, 2018
January, 2018
6
November, 2020
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
39
bigWig
38
bam
21
tsv
17
bed bedMethyl
17
bigBed bedMethyl
7
bed narrowPeak
2
bed bed3+
2
bigBed narrowPeak
2
hdf5
Organism
56
Homo sapiens
Biosample type
46
tissue
10
primary cell
Organ
15
heart
14
brain
epithelium
8
musculature of body
7
vasculature
6
blood vessel
6
kidney
6
liver
5
connective tissue
5
limb
4
pancreas
3
adipose tissue
1
artery
1
eye
1
pericardium
Project
56
AMP
Genome assembly (visualization)
39
hg19
35
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
January, 2018
organ_slims!
epithelium
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
56 results
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Clear Filters
small RNA-seq
WGBS
RRBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
4
1
2
gastrocnemius medialis
4
right lobe of liver
2
1
aorta
2
body of pancreas
2
+ See 24 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain pericyte
1
cardiac fibroblast
1
+ See 4 more…
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