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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
33
DNase-seq
20
total RNA-seq
6
Hi-C
5
RRBS
2
small RNA-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
20
Transcription
Date released
8
August, 2021
4
February, 2018
2
February, 2020
2
July, 2019
2
March, 2020
2
May, 2021
Available data
20
tsv
18
bam
18
bigWig
4
fastq
Organism
20
Homo sapiens
Biosample type
8
cell line
6
in vitro differentiated cells
5
tissue
1
primary cell
Organ
474
connective tissue
398
adipose tissue
397
pancreas
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
January, 2018
BIOSAMPLE
ASSAY
20 results
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total RNA-seq
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
tissue
psoas muscle
2
gastrocnemius medialis
1
left ventricle myocardium
1
skeletal muscle tissue
1
primary cell
skeletal muscle satellite cell
1
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