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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
59
DNA binding
44
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
65
October, 2019
32
June, 2019
May, 2019
6
February, 2021
5
July, 2019
Available data
107
bam
86
bed narrowPeak
85
bigWig
78
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
108
Homo sapiens
Biosample type
108
tissue
Organ
617
liver
527
pancreas
363
epithelium
325
kidney
232
brain
205
connective tissue
204
heart
118
vasculature
112
blood vessel
108
limb
101
bone element
89
adipose tissue
79
musculature of body
78
artery
68
blood
68
bodily fluid
56
eye
38
nerve
24
spleen
22
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
108
AMP
Genome assembly (visualization)
87
GRCh38
86
hg19
Lab
108
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
January, 2018
May, 2019
files.file_type!
tsv
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of arm
17
muscle of leg
13
1
gastrocnemius medialis
4
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