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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
17
DNA binding
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
17
control
1
histone
histone modification
1
narrow histone mark
Date released
20
October, 2019
5
July, 2019
3
February, 2020
1
May, 2019
Available data
66
bam
bed narrowPeak
43
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
29
Homo sapiens
Biosample type
29
tissue
Organ
708
pancreas
565
connective tissue
447
adipose tissue
368
epithelium
328
liver
202
heart
171
kidney
151
bone element
98
vasculature
96
blood vessel
67
artery
63
brain
29
limb
29
musculature of body
26
eye
21
embryo
20
lung
16
nerve
14
blood
14
bodily fluid
11
spleen
8
skeleton
4
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
29
AMP-T2D consortium
month_released!
January, 2018
target.investigated_as!
histone modification
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
5
tibial artery
5
1
gastrocnemius medialis
1
4
muscle of leg
1
1
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