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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
18
DNase-seq
8
snATAC-seq
Assay category
60
DNA binding
26
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
18
June, 2019
15
November, 2018
8
January, 2021
January, 2018
Available data
78
bam
72
bed narrowPeak
72
bigBed narrowPeak
72
bigWig
60
fastq
18
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
Organism
86
Homo sapiens
Biosample type
60
cell line
18
tissue
8
primary cell
Organ
946
pancreas
791
liver
683
connective tissue
524
epithelium
490
adipose tissue
354
kidney
353
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
95
musculature of body
68
blood
68
bodily fluid
61
eye
43
nerve
36
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
78
AMP
8
T1D
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
78
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
month_released!
January, 2018
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
DNase-seq
snATAC-seq
cell line
GM12878
60
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
primary cell
peripheral blood mononuclear cell
8
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