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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
1522
total RNA-seq
531
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
January, 2018
3
February, 2021
Available data
5
bigWig
5
fastq
3
tsv
Organism
8
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
tissue
1
stem cell
Organ
3
kidney
1
embryo
Project
8
AMP
Genome assembly (visualization)
5
hg18
Lab
8
AMP-T2D consortium
month_released!
January, 2019
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
8 results
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GRO-seq
snDrop-seq
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
stem cell
hESC
1
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