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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
ChIP-seq
Assay category
150
DNA binding
Target of assay
84
histone
84
histone modification
66
control
45
broad histone mark
39
narrow histone mark
Date released
67
August, 2017
31
May, 2020
24
November, 2017
9
October, 2019
8
October, 2017
7
August, 2021
3
February, 2021
1
May, 2021
Available data
345
bam
223
fastq
182
tsv
161
txt
151
bed narrowPeak
150
tagAlign
145
bigWig
40
bigBed narrowPeak
36
bed broadPeak
19
bedpe bed3+
17
hic
14
bigBed broadPeak
10
bed bed3
9
bed bedMethyl
9
bigBed bedMethyl
8
bed bed3+
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
vcf
Organism
149
Homo sapiens
Biosample type
122
tissue
22
in vitro differentiated cells
6
cell line
primary cell
Organ
54
liver
36
brain
22
connective tissue
15
musculature of body
11
pancreas
8
adipose tissue
2
artery
2
blood vessel
2
heart
2
vasculature
1
epithelium
Project
150
AMP
Genome assembly (visualization)
GRCh38
139
hg19
Lab
150
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
January, 2019
biosample_type!
primary cell
assembly!
GRCh38
BIOSAMPLE
ASSAY
150 results
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ChIP-seq
tissue
liver
51
skeletal muscle tissue
15
islet of Langerhans
9
brain
8
cingulate gyrus
8
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
HepG2
3
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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