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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
41
DNA binding
9
DNA accessibility
Target of assay
36
transcription factor
4
RNA binding protein
3
chromatin remodeller
3
control
Date released
26
December, 2018
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
41
bam
41
fastq
39
bigWig
38
bed narrowPeak
38
bigBed narrowPeak
Organism
50
Homo sapiens
Biosample type
42
cell line
8
primary cell
Organ
946
pancreas
759
liver
680
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
50
blood
50
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
42
AMP
8
T1D
Genome assembly (visualization)
39
hg19
38
GRCh38
Lab
42
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
inconsistent control
month_released!
January, 2019
files.file_type!
bed bedgraph
audit.ERROR.category!
inconsistent control
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
41
1
primary cell
peripheral blood mononuclear cell
8
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