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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
15
total RNA-seq
Assay category
105
DNA binding
15
Transcription
Target of assay
38
histone
38
histone modification
38
transcription factor
29
control
21
narrow histone mark
17
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
399
May, 2021
395
August, 2017
385
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
83
December, 2017
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
120
bam
120
fastq
90
bigWig
75
bed narrowPeak
50
bigBed narrowPeak
15
tsv
9
bed bed3+
Organism
120
Homo sapiens
Biosample type
71
in vitro differentiated cells
48
tissue
1
stem cell
Organ
63
liver
23
embryo
18
epithelium
Project
120
AMP
Genome assembly (visualization)
95
GRCh38
95
hg19
Lab
120
AMP-T2D consortium
Audit category:
27
inconsistent control
3
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
month_released!
January, 2019
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
16
4
hepatocyte
15
primitive gut cell
6
2
definitive endodermal cell
4
2
embryonic stem cell
3
2
+ See 5 more…
tissue
liver
38
right lobe of liver
10
stem cell
hESC
1
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