Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
196
DNase-seq
101
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
197
DNA accessibility
101
DNA binding
7
DNA methylation
1
Transcription
Target of assay
68
transcription factor
25
RNA binding protein
19
histone
19
histone modification
16
recombinant protein
14
control
11
narrow histone mark
8
broad histone mark
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
715
February, 2021
411
August, 2017
406
November, 2017
398
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
305
bam
290
bigWig
283
bed narrowPeak
283
bigBed narrowPeak
196
bed bed3+
196
bed broadPeak
196
bigBed broadPeak
88
fastq
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
306
Homo sapiens
Biosample type
189
tissue
61
cell line
56
primary cell
Organ
81
kidney
55
liver
43
musculature of body
35
heart
32
brain
32
limb
20
epithelium
19
connective tissue
18
ureter
15
blood
15
bodily fluid
11
pancreas
9
spleen
7
eye
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
Project
306
AMP
Genome assembly (visualization)
289
GRCh38
258
hg19
Lab
306
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
January, 2019
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
306 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
cell line
HepG2
45
1
GM12878
15
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 18 more…
See all biosamples
Download