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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
756
histone modification
755
histone
446
transcription factor
378
narrow histone mark
376
broad histone mark
91
RNA binding protein
88
recombinant protein
29
chromatin remodeller
5
other context
5
other post-translational modification
Date released
33
November, 2017
21
November, 2018
11
October, 2018
7
August, 2017
January, 2019
5
May, 2024
4
May, 2019
3
April, 2019
2
December, 2017
2
December, 2018
2
June, 2019
1
August, 2021
Available data
92
bigWig
91
bed narrowPeak
89
bam
80
bigBed narrowPeak
79
fastq
7
bed broadPeak
7
bigBed broadPeak
2
bed bed3+
1
tar
Organism
91
Homo sapiens
Biosample type
56
cell line
26
tissue
5
primary cell
4
in vitro differentiated cells
Organ
56
liver
11
heart
10
connective tissue
epithelium
8
pancreas
5
adipose tissue
5
vasculature
4
blood
4
blood vessel
4
bodily fluid
3
brain
2
kidney
1
artery
1
eye
Project
91
AMP
Genome assembly (visualization)
85
GRCh38
85
hg19
Lab
85
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
month_released!
January, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ChIP-seq
cell line
HepG2
52
GM12878
4
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
subcutaneous adipose tissue
2
+ See 8 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
cardiac fibroblast
1
cardiac muscle cell
1
in vitro differentiated cells
adipocyte
4
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