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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
15
DNA binding
9
DNA accessibility
Target of assay
12
transcription factor
3
control
2
RNA binding protein
2
chromatin remodeller
Date released
December, 2018
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
15
bam
15
fastq
13
bigWig
12
bed narrowPeak
12
bigBed narrowPeak
Organism
24
Homo sapiens
Biosample type
16
cell line
8
primary cell
Organ
946
pancreas
785
liver
684
connective tissue
524
epithelium
491
adipose tissue
354
kidney
353
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
43
nerve
37
embryo
24
blood
24
bodily fluid
22
vein
20
lung
18
ureter
16
skeleton
11
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
8
T1D
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
16
AMP-T2D consortium
8
Kyle Gaulton, UCSD
month_released!
January, 2019
December, 2018
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
15
1
primary cell
peripheral blood mononuclear cell
8
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