Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
897
histone modification
896
histone
463
narrow histone mark
455
transcription factor
433
broad histone mark
304
control
93
RNA binding protein
89
recombinant protein
28
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
15
November, 2017
7
November, 2018
January, 2019
3
December, 2017
2
December, 2018
1
August, 2017
Available data
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
28
fastq
5
bed broadPeak
5
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
24
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
23
liver
4
blood
4
bodily fluid
connective tissue
1
epithelium
Project
28
AMP
Genome assembly (visualization)
28
hg19
26
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
month_released!
January, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
20
GM12878
4
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
Download