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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
4
July, 2019
Available data
2389
bam
2207
bigWig
1171
tsv
1145
bed narrowPeak
846
fastq
742
bigBed narrowPeak
379
tagAlign
151
txt
102
bed broadPeak
79
bigBed broadPeak
52
zippedFastqFolder
42
bed bed3+
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
8
csv
4
hdf5
3
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
month_released!
January, 2021
assay_slims!
DNA accessibility
organ_slims!
pancreas
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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