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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
38
ATAC-seq
9
DNase-seq
1
FAIRE-seq
1
snATAC-seq
Assay category
61
DNA binding
49
DNA accessibility
Target of assay
61
transcription factor
21
RNA binding protein
13
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
109
bed narrowPeak
91
bigWig
89
bam
89
fastq
71
bigBed narrowPeak
10
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
1
txt
Organism
110
Homo sapiens
Biosample type
56
tissue
54
cell line
Organ
69
liver
21
pancreas
12
blood
12
bodily fluid
4
spleen
2
brain
1
adipose tissue
1
connective tissue
1
musculature of body
Project
110
AMP
Genome assembly (visualization)
110
hg19
79
GRCh38
Lab
72
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
1
audit script error
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
January, 2021
BIOSAMPLE
ASSAY
110 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
snATAC-seq
tissue
liver
4
20
2
islet of Langerhans
18
spleen
3
1
body of pancreas
2
brain
2
+ See 4 more…
cell line
HepG2
42
GM12878
12
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