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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
single cell RNA-seq
92
total RNA-seq
snATAC-seq
49
ATAC-seq
47
WGBS
3
Hi-C
Assay category
186
Transcription
49
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
113
May, 2022
76
February, 2023
59
September, 2020
18
February, 2021
9
April, 2020
7
August, 2020
3
October, 2022
Available data
142
fastq
132
zippedFastqFolder
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
285
Homo sapiens
Biosample type
276
primary cell
9
tissue
Organ
152
epithelium
152
pancreas
9
lung
Project
4284
AMP
276
HPAP
226
T1D
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
276
Klaus Kaestner, Upenn
9
Xin Sun, UCSD
Audit category:
3
audit script error
month_released!
January, 2021
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
285 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
29
31
1
Langerhans cell
85
pancreatic beta cell
11
16
16
1
exocrine cell
39
pancreatic acinar cell
4
1
tissue
lung
9
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