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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
247
total RNA-seq
44
ChIP-seq
21
ATAC-seq
1
pCHi-C
Assay category
247
Transcription
44
DNA binding
21
DNA accessibility
Target of assay
22
histone
22
histone modification
16
transcription factor
12
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
248
bigWig
244
bam
237
tsv
6
bed narrowPeak
6
tagAlign
2
fastq
Organism
313
Homo sapiens
Biosample type
primary cell
160
tissue
132
in vitro differentiated cells
21
cell line
Organ
181
pancreas
26
epithelium
3
heart
2
embryo
1
connective tissue
1
thymus
Project
311
AMP
2
T1D
Genome assembly (visualization)
248
hg19
243
GRCh38
Lab
264
AMP-T2D consortium
49
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
month_released!
January, 2021
biosample_type!
primary cell
BIOSAMPLE
ASSAY
313 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
156
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
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cell line
EndoC_BH1
4
1
16
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