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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
total RNA-seq
13
ChIP-seq
2
Hi-C
Assay category
DNA accessibility
20
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
183
August, 2017
July, 2018
58
September, 2018
53
October, 2018
47
May, 2022
45
May, 2021
43
February, 2023
39
April, 2018
35
November, 2019
32
February, 2021
16
September, 2020
14
October, 2019
10
March, 2020
10
November, 2020
6
July, 2019
6
September, 2017
4
August, 2021
4
November, 2018
3
August, 2018
3
October, 2022
2
May, 2019
1
February, 2020
1
June, 2018
1
March, 2019
Available data
33
bam
31
bigWig
20
tsv
11
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
35
Homo sapiens
Biosample type
20
tissue
15
cell line
Organ
35
pancreas
15
epithelium
Project
35
AMP
Genome assembly (visualization)
33
hg19
31
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
month_released!
July, 2018
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
35 results
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Clear Filters
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
cell line
EndoC_BH1
1
13
1
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