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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
25
ChIP-seq
DNase-seq
Assay category
54
Transcription
45
DNA accessibility
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
19
October, 2019
3
July, 2019
3
May, 2019
Available data
89
bam
81
bigWig
70
bed narrowPeak
54
tsv
21
bigBed narrowPeak
4
tagAlign
Organism
124
Homo sapiens
Biosample type
64
cell line
58
tissue
2
primary cell
Organ
555
connective tissue
526
liver
474
pancreas
422
adipose tissue
244
epithelium
236
heart
185
brain
180
vasculature
178
blood vessel
126
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
embryo
29
nerve
20
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
124
AMP
Genome assembly (visualization)
124
GRCh38
89
hg19
Lab
124
AMP-T2D consortium
month_released!
July, 2018
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
124 results
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total RNA-seq
ATAC-seq
ChIP-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
36
3
tibial artery
1
18
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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