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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
total RNA-seq
53
ATAC-seq
25
ChIP-seq
4
DNase-seq
Assay category
112
Transcription
57
DNA accessibility
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
130
February, 2021
35
February, 2023
21
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
159
bam
143
bigWig
112
tsv
82
bed narrowPeak
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
194
Homo sapiens
Biosample type
128
tissue
64
cell line
2
primary cell
Organ
564
connective tissue
531
liver
482
pancreas
424
adipose tissue
266
heart
261
epithelium
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
194
AMP
Genome assembly (visualization)
194
GRCh38
163
hg19
Lab
194
AMP-T2D consortium
month_released!
July, 2018
BIOSAMPLE
ASSAY
194 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
tissue
bone tissue
58
coronary artery
36
3
2
tibial artery
1
18
2
distal epiphysis
1
distal epiphysis of femur
1
+ See 6 more…
cell line
smooth muscle cell of the coronary artery
52
8
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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