Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
97
total RNA-seq
83
ATAC-seq
47
WGBS
37
single cell RNA-seq
18
DNase-seq
7
Hi-C
5
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
18
DNA accessibility
Date released
13
June, 2019
5
October, 2019
Available data
16
bam
16
bed narrowPeak
16
bigBed narrowPeak
16
bigWig
15
bed bed3+
15
bed broadPeak
15
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
17
primary cell
1
cell line
Organ
80
kidney
35
limb
32
brain
32
musculature of body
29
heart
18
epithelium
18
ureter
10
vasculature
9
blood vessel
8
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
18
AMP
Genome assembly (visualization)
16
GRCh38
10
hg19
Lab
18
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
July, 2018
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
primary cell
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
brain microvascular endothelial cell
1
+ See 7 more…
cell line
glomerular visceral epithelial cell
1
See all biosamples
Download