Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
Hi-C
Assay category
1585
DNA binding
1270
Transcription
653
DNA accessibility
50
DNA methylation
26
3D chromatin structure
1
DNA sequencing
Date released
8
July, 2019
8
March, 2020
3
August, 2021
3
October, 2019
2
November, 2019
1
December, 2018
1
March, 2019
Available data
15
hic
13
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
1
bedpe
1
fastq
Organism
26
Homo sapiens
Biosample type
16
tissue
6
primary cell
4
cell line
in vitro differentiated cells
Organ
6
musculature of body
6
pancreas
5
blood vessel
5
epithelium
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
26
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
20
hg19
1
GRCh38
Lab
22
AMP-T2D consortium
3
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
July, 2018
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
3
psoas muscle
2
aorta
1
heart
1
+ See 5 more…
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
cell line
HepG2
2
EndoC_BH1
1
Panc1
1
See all biosamples
Download