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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
25
ChIP-seq
15
total RNA-seq
10
ATAC-seq
2
Capture-C
1
RNA microarray
Assay category
113
Transcription
25
DNA binding
10
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
8
control
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
113
tsv
49
bam
31
bigWig
26
bed narrowPeak
24
tagAlign
3
bed bed3+
Organism
150
Homo sapiens
Biosample type
99
tissue
38
in vitro differentiated cells
10
cell line
4
primary cell
Organ
92
heart
8
embryo
6
blood vessel
6
epithelium
6
vasculature
4
liver
2
artery
2
pancreas
1
adipose tissue
1
connective tissue
Project
151
AMP
Genome assembly (visualization)
41
GRCh38
40
hg19
Lab
151
AMP-T2D consortium
128
Katalin Susztak, Upenn
36
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
month_released!
July, 2018
BIOSAMPLE
ASSAY
151 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
RNA microarray
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
aorta
4
+ See 9 more…
in vitro differentiated cells
neural progenitor cell
21
7
10
cell line
H1-hESC
8
EndoC_BH1
2
primary cell
hepatocyte
4
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