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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
47
total RNA-seq
31
ChIP-seq
24
DNase-seq
1
pCHi-C
Assay category
124
DNA accessibility
47
Transcription
31
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
145
bam
137
bigWig
47
bed narrowPeak
47
bigBed narrowPeak
46
tsv
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
Organism
203
Homo sapiens
Biosample type
tissue
202
primary cell
1
cell line
Organ
20
epithelium
17
connective tissue
13
kidney
11
musculature of body
8
heart
5
brain
4
eye
4
vasculature
3
liver
2
blood vessel
Project
158
AMP
45
T1D
Genome assembly (visualization)
130
hg19
92
GRCh38
Lab
158
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
33
inconsistent ontology term
month_released!
July, 2018
biosample_type!
tissue
BIOSAMPLE
ASSAY
203 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
+ See 46 more…
cell line
HepG2
1
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