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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
38
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
201
DNA accessibility
38
DNA binding
27
Transcription
Target of assay
51
histone
51
histone modification
26
narrow histone mark
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
265
bam
257
bigWig
231
bed narrowPeak
216
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
56
fastq
26
tsv
1
csv
Organism
266
Homo sapiens
Biosample type
163
tissue
103
primary cell
Organ
81
kidney
71
epithelium
59
pancreas
39
musculature of body
35
heart
32
limb
30
brain
18
ureter
14
connective tissue
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
266
AMP
Genome assembly (visualization)
257
GRCh38
234
hg19
Lab
266
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
Audit category:
15
missing controlled_by
month_released!
July, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
266 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic ductal cell
7
4
4
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic acinar cell
4
2
3
cardiac fibroblast
3
5
+ See 23 more…
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