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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
single cell RNA-seq
1
WGBS
1
pCHi-C
Assay category
67
Transcription
1
DNA methylation
Date released
52
February, 2021
6
August, 2021
6
July, 2019
3
February, 2020
2
March, 2020
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
69
Homo sapiens
Biosample type
52
cell line
15
tissue
2
primary cell
Organ
479
connective tissue
403
adipose tissue
270
pancreas
177
liver
176
heart
129
epithelium
70
vasculature
69
blood vessel
58
artery
58
bone element
28
brain
28
kidney
14
embryo
13
musculature of body
8
limb
6
eye
5
nerve
3
spleen
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
69
AMP
Genome assembly (visualization)
59
GRCh38
58
hg19
Lab
69
AMP-T2D consortium
month_released!
July, 2018
BIOSAMPLE
ASSAY
69 results
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total RNA-seq
single cell RNA-seq
WGBS
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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