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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
9
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
9
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
55
bam
33
bed narrowPeak
27
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
57
Homo sapiens
Biosample type
40
tissue
12
cell line
5
in vitro differentiated cells
Organ
51
pancreas
12
epithelium
1
adipose tissue
1
connective tissue
Project
57
AMP
Genome assembly (visualization)
55
hg19
53
GRCh38
Lab
57
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
month_released!
July, 2018
September, 2023
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
9
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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