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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
ATAC-seq
8
DNase-seq
2
FAIRE-seq
Assay category
59
DNA binding
10
DNA accessibility
Target of assay
49
histone
49
histone modification
30
broad histone mark
19
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
14
August, 2017
7
October, 2019
4
June, 2019
3
November, 2018
1
May, 2019
Available data
620
bam
578
bigWig
415
fastq
411
tsv
150
bed narrowPeak
69
bigBed narrowPeak
41
zippedFastqFolder
29
bed bed3+
19
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
txt
4
bed bedMethyl
4
bigBed bedMethyl
3
cool
1
bedpe
1
hdf5
Organism
63
Homo sapiens
Biosample type
62
tissue
7
cell line
Organ
357
liver
126
brain
103
kidney
94
heart
84
limb
83
vasculature
79
blood vessel
69
pancreas
54
blood
54
bodily fluid
54
epithelium
47
musculature of body
26
nerve
25
artery
24
connective tissue
18
ureter
13
spleen
13
vein
8
adipose tissue
6
eye
Project
69
AMP
Genome assembly (visualization)
67
GRCh38
67
hg19
Lab
69
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
month_released!
July, 2019
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
13
2
1
endocrine pancreas
14
islet of Langerhans
1
1
cell line
Panc1
6
1
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