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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Date released
92
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
tsv
8
bed narrowPeak
4
bed bed3
Organism
101
Homo sapiens
Biosample type
100
tissue
1
primary cell
Organ
608
liver
519
pancreas
341
epithelium
244
kidney
221
brain
195
connective tissue
181
heart
150
vasculature
147
blood vessel
101
bone element
88
adipose tissue
78
artery
74
limb
69
blood
69
bodily fluid
51
eye
48
musculature of body
36
nerve
23
embryo
23
spleen
20
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
thymus
Project
100
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
100
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
month_released!
July, 2019
assay_title!
DNase-seq
files.file_type!
tsv
BIOSAMPLE
ASSAY
101 results
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RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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