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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
1
pCHi-C
Assay category
39
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
28
histone
28
histone modification
16
broad histone mark
12
narrow histone mark
11
control
Date released
46
October, 2019
1
February, 2020
1
March, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
6
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
48
Homo sapiens
Biosample type
48
tissue
Organ
940
pancreas
773
liver
666
connective tissue
511
epithelium
479
adipose tissue
368
heart
343
kidney
268
brain
224
vasculature
219
blood vessel
159
bone element
138
artery
117
limb
86
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
48
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
48
AMP-T2D consortium
month_released!
July, 2019
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
5
2
1
islet of Langerhans
4
ovary
1
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