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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
36
DNase-seq
9
ATAC-seq
7
total RNA-seq
Assay category
67
DNA binding
45
DNA accessibility
7
Transcription
Target of assay
50
histone
50
histone modification
34
broad histone mark
17
control
16
narrow histone mark
Date released
71
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
July, 2019
3
February, 2020
Available data
114
bam
93
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
tagAlign
Organism
119
Homo sapiens
Biosample type
119
tissue
Organ
939
pancreas
781
liver
666
connective tissue
511
epithelium
479
adipose tissue
368
heart
343
kidney
268
brain
224
vasculature
219
blood vessel
159
bone element
138
artery
117
limb
86
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
119
AMP
Genome assembly (visualization)
97
hg19
96
GRCh38
Lab
119
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
files.file_type!
bedpe
BIOSAMPLE
ASSAY
119 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
2
1
5
tibial artery
23
2
1
1
muscle of leg
7
13
muscle of arm
17
islet of Langerhans
1
1
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