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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
WGBS
4
RRBS
Assay category
13
DNA methylation
Date released
July, 2019
7
November, 2018
6
August, 2017
Available data
3098
bam
2892
bigWig
1747
bed narrowPeak
1385
tsv
1347
fastq
1016
bigBed narrowPeak
395
tagAlign
318
bed broadPeak
281
bigBed broadPeak
263
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
18
hic
bedpe bed3+
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
6
bed bedgraph
4
tar
3
cool
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
11
tissue
1
cell line
1
primary cell
Organ
4
pancreas
2
adipose tissue
2
connective tissue
2
liver
2
musculature of body
2
spleen
Project
13
AMP
Genome assembly (visualization)
9
GRCh38
4
hg19
Lab
13
AMP-T2D consortium
month_released!
July, 2019
files.file_type!
bedpe bed3+
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
13 results
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WGBS
RRBS
tissue
adipose tissue
2
body of pancreas
2
pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 1 more…
cell line
HepG2
1
primary cell
skeletal muscle myoblast
1
See all biosamples
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