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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
28
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
36
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
February, 2021
35
February, 2023
24
October, 2019
5
May, 2019
July, 2019
2
August, 2021
2
February, 2020
Available data
61
bed narrowPeak
33
bam
26
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
4
tsv
Organism
68
Homo sapiens
Biosample type
68
tissue
Organ
901
pancreas
715
liver
457
epithelium
272
heart
257
kidney
230
brain
202
connective tissue
141
vasculature
140
blood vessel
91
adipose tissue
75
limb
69
blood
69
bodily fluid
68
artery
56
eye
53
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
68
AMP
Genome assembly (visualization)
57
GRCh38
22
hg19
Lab
68
AMP-T2D consortium
month_released!
July, 2019
February, 2021
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
5
1
tibial artery
1
23
1
pulmonary artery
2
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