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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
WGBS
7
ATAC-seq
4
RRBS
Assay category
13
DNA methylation
7
DNA accessibility
Date released
July, 2019
7
November, 2018
6
August, 2017
4
February, 2021
3
February, 2023
Available data
3310
bam
3044
bigWig
1770
bed narrowPeak
1535
tsv
1358
fastq
1040
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
20
Homo sapiens
Biosample type
11
tissue
7
in vitro differentiated cells
1
cell line
1
primary cell
Organ
6
connective tissue
4
pancreas
2
adipose tissue
2
liver
2
musculature of body
2
spleen
Project
20
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
17
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
BIOSAMPLE
ASSAY
20 results
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WGBS
ATAC-seq
RRBS
tissue
adipose tissue
2
body of pancreas
2
pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 1 more…
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
HepG2
1
primary cell
skeletal muscle myoblast
1
See all biosamples
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