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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
1
FAIRE-seq
1
Hi-C
Assay category
3
DNA binding
1
3D chromatin structure
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
July, 2019
3
November, 2017
2
October, 2019
Available data
3310
bam
3084
bigWig
1810
bed narrowPeak
1535
tsv
1358
fastq
1040
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
4
cell line
1
primary cell
Organ
3
liver
1
blood vessel
1
epithelium
1
pancreas
1
vasculature
1
vein
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent assembly
month_released!
July, 2019
month_released!!
July, 2019
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
FAIRE-seq
Hi-C
cell line
HepG2
3
Panc1
1
primary cell
endothelial cell of umbilical vein
1
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