Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
21
snATAC-seq
1
whole genome sequencing assay
Assay category
52
Transcription
21
DNA accessibility
1
DNA sequencing
Date released
54
May, 2022
19
September, 2020
1
August, 2021
Available data
2625
bam
2465
bigWig
1596
bed narrowPeak
1122
tsv
949
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
240
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
16
bedpe bed3+
16
hic
12
bed bed3
9
bed bedMethyl
9
bigBed bedMethyl
8
csv
7
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
74
Homo sapiens
Biosample type
73
primary cell
1
cell line
Organ
80
epithelium
pancreas
1
liver
Project
73
HPAP
1
AMP
Lab
73
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
month_released!
July, 2019
organ_slims!
pancreas
BIOSAMPLE
ASSAY
74 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
snATAC-seq
whole genome sequencing assay
primary cell
Langerhans cell
52
21
cell line
HepG2
1
Download