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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
20
total RNA-seq
12
ChIP-seq
2
Hi-C
Assay category
21
DNA accessibility
20
Transcription
12
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
RNA binding protein
1
transcription factor
Date released
689
February, 2021
369
November, 2017
341
May, 2020
339
August, 2017
306
October, 2019
276
August, 2021
267
May, 2021
214
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
115
May, 2019
July, 2019
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
59
September, 2020
56
March, 2020
55
November, 2019
49
April, 2018
49
December, 2017
47
September, 2023
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
53
bam
31
bed narrowPeak
30
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
55
Homo sapiens
Biosample type
40
tissue
15
cell line
in vitro differentiated cells
Organ
54
pancreas
15
epithelium
1
adipose tissue
1
connective tissue
Project
55
AMP
Genome assembly (visualization)
53
hg19
51
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
month_released!
July, 2019
target.investigated_as!
RNA binding protein
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
12
1
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