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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
13
ChIP-seq
2
total RNA-seq
Assay category
33
DNA accessibility
13
DNA binding
2
Transcription
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
41
June, 2019
July, 2019
5
May, 2019
2
March, 2020
Available data
48
bam
48
bigWig
46
bed narrowPeak
46
bigBed narrowPeak
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
2
tsv
Organism
48
Homo sapiens
Biosample type
39
tissue
9
primary cell
Organ
631
pancreas
550
connective tissue
524
liver
412
adipose tissue
289
epithelium
245
heart
205
brain
199
kidney
183
vasculature
179
blood vessel
125
artery
95
limb
66
bone element
54
blood
54
bodily fluid
48
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pituitary gland
Project
48
AMP
Genome assembly (visualization)
68
hg19
48
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
month_released!
July, 2019
organ_slims!
intestine
BIOSAMPLE
ASSAY
48 results
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DNase-seq
ChIP-seq
total RNA-seq
tissue
muscle of leg
13
5
muscle of arm
17
psoas muscle
2
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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