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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
389
total RNA-seq
ChIP-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
pCHi-C
1
RNA microarray
Assay category
389
Transcription
8
DNA accessibility
6
DNA methylation
Date released
386
February, 2021
July, 2019
7
August, 2017
2
February, 2020
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
394
bigWig
393
bam
388
tsv
6
bed narrowPeak
6
fastq
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
403
Homo sapiens
Biosample type
404
tissue
Organ
721
pancreas
508
connective tissue
404
adipose tissue
382
epithelium
289
kidney
231
heart
226
liver
158
bone element
121
vasculature
119
blood vessel
104
artery
51
eye
51
limb
48
brain
46
musculature of body
19
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
vein
4
spleen
1
pituitary gland
1
skin of body
1
spinal cord
Project
404
AMP
Genome assembly (visualization)
395
hg19
394
GRCh38
Lab
404
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
assay_title!
ChIP-seq
pCHi-C
BIOSAMPLE
ASSAY
404 results
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total RNA-seq
ATAC-seq
WGBS
DNase-seq
RNA microarray
tissue
adipose tissue
382
3
3
subcutaneous adipose tissue
3
1
1
omental fat pad
1
1
2
subcutaneous abdominal adipose tissue
3
visceral abdominal adipose tissue
3
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