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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
28
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
40
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
July, 2019
Available data
61
bed narrowPeak
33
bam
26
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
72
Homo sapiens
Biosample type
72
tissue
66
cell line
Organ
537
connective tissue
499
pancreas
478
adipose tissue
353
liver
295
kidney
254
brain
253
heart
158
bone element
126
blood vessel
126
vasculature
117
limb
75
musculature of body
72
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
72
AMP
Genome assembly (visualization)
61
GRCh38
26
hg19
Lab
72
AMP-T2D consortium
month_released!
July, 2019
BIOSAMPLE
ASSAY
72 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
5
2
1
tibial artery
1
23
2
1
pulmonary artery
2
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