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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
126
total RNA-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
6
Hi-C
6
MeRIP-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
6
3D chromatin structure
Date released
3
October, 2022
July, 2019
1
March, 2020
1
November, 2019
1
October, 2019
Available data
6
hic
5
bedpe bed3+
3
cool
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
cell line
Organ
9
pancreas
6
epithelium
3
blood vessel
3
heart
3
liver
3
vasculature
2
musculature of body
2
vein
1
kidney
Project
3
AMP
3
HPAP
Genome assembly (visualization)
6
hg19
Lab
3
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
4
audit script error
1
inconsistent ontology term
month_released!
July, 2019
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
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