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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
2
total RNA-seq
Assay category
19
DNA binding
2
Transcription
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
19
December, 2017
2
May, 2021
Available data
24
bam
20
bigWig
19
fastq
18
bed narrowPeak
14
bigBed narrowPeak
tagAlign
2
tsv
Organism
21
Homo sapiens
Biosample type
389
primary cell
79
cell line
21
in vitro differentiated cells
15
tissue
Organ
83
connective tissue
29
embryo
21
epithelium
15
liver
1
adipose tissue
1
heart
Project
21
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
21
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
July, 2019
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
endothelial cell
1
intermediate endothelial cell
1
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