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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
35
DNase-seq
8
ATAC-seq
7
total RNA-seq
1
pCHi-C
Assay category
70
DNA binding
43
DNA accessibility
7
Transcription
Target of assay
53
histone
53
histone modification
34
broad histone mark
19
narrow histone mark
17
control
Date released
73
October, 2019
31
June, 2019
7
May, 2019
6
February, 2021
July, 2019
3
February, 2020
1
March, 2020
Available data
112
bam
91
bed narrowPeak
89
bigWig
83
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
8
tsv
Organism
121
Homo sapiens
Biosample type
121
tissue
Organ
859
pancreas
780
liver
648
connective tissue
478
adipose tissue
421
epithelium
363
heart
321
kidney
265
brain
223
vasculature
219
blood vessel
138
artery
116
limb
77
musculature of body
75
bone element
69
blood
69
bodily fluid
60
eye
43
nerve
31
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
121
AMP
Genome assembly (visualization)
95
hg19
94
GRCh38
Lab
121
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
July, 2019
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
121 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
pCHi-C
tissue
tibial nerve
35
2
1
5
tibial artery
23
2
1
1
muscle of leg
7
12
muscle of arm
17
islet of Langerhans
5
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