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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
36
DNase-seq
ATAC-seq
7
total RNA-seq
Assay category
59
DNA binding
36
DNA accessibility
7
Transcription
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
67
October, 2019
32
June, 2019
May, 2019
July, 2019
3
February, 2020
Available data
98
bam
82
bigWig
78
bed narrowPeak
78
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
102
Homo sapiens
Biosample type
102
tissue
Organ
786
pancreas
758
liver
641
connective tissue
473
adipose tissue
403
epithelium
304
heart
263
kidney
237
brain
147
bone element
130
vasculature
125
blood vessel
102
limb
89
artery
78
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
32
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
102
AMP
Genome assembly (visualization)
82
GRCh38
82
hg19
Lab
102
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
May, 2019
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
102 results
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ChIP-seq
DNase-seq
total RNA-seq
tissue
tibial nerve
35
2
5
tibial artery
23
2
1
muscle of arm
17
muscle of leg
13
forelimb muscle
1
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