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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
80
single cell RNA-seq
Assay category
475
Transcription
159
DNA binding
141
DNA accessibility
51
DNA methylation
9
3D chromatin structure
Date released
157
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
16
September, 2020
6
May, 2022
5
March, 2020
July, 2019
3
August, 2018
2
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
408
bam
404
tsv
402
bigWig
253
fastq
6
txt
Organism
475
Homo sapiens
Biosample type
287
tissue
155
primary cell
33
cell line
Organ
475
pancreas
465
connective tissue
389
adipose tissue
196
epithelium
186
liver
155
heart
119
kidney
62
blood vessel
62
bone element
62
vasculature
56
artery
19
eye
14
embryo
13
brain
9
lung
7
limb
5
musculature of body
5
nerve
4
skeleton
1
spinal cord
Project
413
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
402
GRCh38
402
hg19
Lab
409
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
month_released!
July, 2019
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
475 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
278
6
pancreas
2
body of pancreas
1
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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cell line
EndoC_BH1
33
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