Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
5
DNase-seq
5
total RNA-seq
2
ATAC-seq
2
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Assay category
72
DNA binding
8
DNA accessibility
5
Transcription
2
3D chromatin structure
2
DNA methylation
Target of assay
45
histone
45
histone modification
29
broad histone mark
21
control
16
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
63
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
2
March, 2020
1
February, 2020
1
October, 2017
Available data
86
bam
62
bigWig
54
bed narrowPeak
52
bigBed narrowPeak
24
fastq
7
bed broadPeak
7
bigBed broadPeak
6
tsv
5
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
hic
1
bedpe bed3+
1
tar
Organism
90
Homo sapiens
Biosample type
68
tissue
22
primary cell
Organ
940
pancreas
781
liver
666
connective tissue
511
epithelium
479
adipose tissue
368
heart
343
kidney
268
brain
224
vasculature
219
blood vessel
159
bone element
138
artery
117
limb
86
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
90
AMP
Genome assembly (visualization)
62
hg19
59
GRCh38
Lab
90
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
July, 2019
BIOSAMPLE
ASSAY
90 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
Hi-C
WGBS
FAIRE-seq
pCHi-C
tissue
tibial nerve
35
2
5
1
spleen
20
1
1
2
1
primary cell
endothelial cell of umbilical vein
17
2
2
1
Download